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hpsl:2021:aut:vsc:binfs [2021/06/05 13:06] (current) – created - external edit 127.0.0.1
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 +====== FS: BINFS ======
 +
 +===== Characteristics =====
 +<data_cdcl>
 +name:BINFS
 +</data_cdcl>
 +
 +
 +===== Description =====
 +
 +The BINFS (short for Bioinformatics small) storage system was procured in late 2016 consisting of 64 x Intel P3600 2 TB SSDs distributed on 16 nodes. Running 8 metadata servers (buddy-mirrored) and 16 OSTs. The nodes are used as storage and compute nodes, therefore they are connected via Intel Omnipath. Each Node also has a Mellanox Infiniband Adapter to connect the Nodes to the rest of the VSC-3.
 +
 +===== Measurement protocols =====
 +
 +==== Peak performance ====
 +
 +The peak performance was achieved with [[tools:benchmarks:ior:start|IOR]] running on the storage nodes (12 Processes per Node) and every process was forced to write on the local disks. So no interconnect was used (except for syncing the ior processes of course). 
 +
 +==== Sustained metadata performance ====
 +
 +The metadata performance was measured with mdtest, running 128 processes distributed over 8 nodes.
 +<code>
 +mdtest-1.9.3 was launched with 128 total task(s) on 8 node(s)
 +Command line used: mdtest ./mdtest -I 5 -z 5 -b 5 -u -d /binfs/xxxx/xxxx/mdtest/
 +Path: /binfs/xxxx/xxxx/mdtest
 +FS: 105.9 TiB   Used FS: 60.2%   Inodes: 0.0 Mi   Used Inodes: -nan%
 +
 +128 tasks, 2499840 files/directories
 +
 +SUMMARY: (of 1 iterations)
 +   Operation                      Max            Min           Mean        Std Dev
 +   ---------                      ---            ---           ----        -------
 +   Directory creation:       7611.328       7611.328       7611.328          0.000
 +   Directory stat    :     203195.314     203195.314     203195.314          0.000
 +   Directory removal :       4554.320       4554.320       4554.320          0.000
 +   File creation     :      47464.587      47464.587      47464.587          0.000
 +   File stat         :     206807.699     206807.699     206807.699          0.000
 +   File read         :      86282.435      86282.435      86282.435          0.000
 +   File removal      :      47321.744      47321.744      47321.744          0.000
 +   Tree creation     :         87.921         87.921         87.921          0.000
 +   Tree removal      :         43.238         43.238         43.238          0.000
 +</code>
 +
 +==== Sustained performance ====
 +
 +Performance of the system has been measured with [[tools:benchmarks:ior:start|IOR]] running on the 16 storage nodes with 12 processes / node.
 +
 +The used BeeGFS configuration was:
 +
 +* BeeGFS 6.7
 +
 +* Striping 4 OSTs per File
 +
 +* Chunksize 8MiB
 +